The evolution of biological sequences, such as proteins or DNAs, is driven by the three basic edit operations: substitution, insertion, and deletion. Motivated by the recent progress of neural network models for biological tasks, we implement two neural network architectures that can treat such edit operations. The first proposal is the edit invariant neural networks, based on differentiable Needleman-Wunsch algorithms. The second is the use of deep CNNs with concatenations. Our analysis shows that CNNs can recognize star-free regular expressions, and that deeper CNNs can recognize more complex regular expressions including the insertion/deletion of characters. The experimental results for the protein secondary structure prediction task suggest the importance of insertion/deletion. The test accuracy on the widely-used CB513 dataset is 71.5%, which is 1.2-points better than the current best result on non-ensemble models.

Large Language Models (LLMs) have become a key topic in AI and NLP, transforming sectors like healthcare, finance, education, and marketing by improving customer service, automating tasks, providing insights, improving diagnostics, and personalizing learning experiences. Information extraction from clinical records is a crucial task in digital healthcare. Although traditional NLP techniques have been used for this in the past, they often fall short due to the complexity, variability of clinical language, and high inner semantics in the free clinical text. Recently, Large Language Models (LLMs) have become a powerful tool for better understanding and generating human-like text, making them highly effective in this area. In this paper, we explore the ability of open-source multilingual LLMs to understand EHRs (Electronic Health Records) in Italian and help extract information from them in real-time. Our detailed experimental campaign on comorbidity extraction from EHR reveals that some LLMs struggle in zero-shot, on-premises settings, and others show significant variation in performance, struggling to generalize across various diseases when compared to native pattern matching and manual annotations.

The evolution of biological sequences, such as proteins or DNAs, is driven by the three basic edit operations: substitution, insertion, and deletion. Motivated by the recent progress of neural network models for biological tasks, we implement two neural network architectures that can treat such edit operations. The first proposal is the edit invariant neural networks, based on differentiable Needleman-Wunsch algorithms. The second is the use of deep CNNs with concatenations. Our analysis shows that CNNs can recognize star-free regular expressions, and that deeper CNNs can recognize more complex regular expressions including the insertion/deletion of characters. The experimental results for the protein secondary structure prediction task suggest the importance of insertion/deletion. The test accuracy on the widely-used CB513 dataset is 71.5%, which is 1.2-points better than the current best result on non-ensemble models.

The evolution of biological sequences, such as proteins or DNAs, is driven by the three basic edit operations: substitution, insertion, and deletion.

The evolution of biological sequences, such as proteins or DNAs, is driven by the three basic edit operations: substitution, insertion, and deletion.

Large language models are increasingly used for many applications. To prevent illicit use, it is desirable to be able to detect AI-generated text. Training and evaluation of such detectors critically depend on suitable benchmark datasets. Several groups took on the tedious work of collecting, curating, and publishing large and diverse datasets for this task. However, it remains an open challenge to ensure high quality in all relevant aspects of such a dataset. For example, the DetectRL benchmark exhibits relatively simple patterns of AI-generation in 98.5% of the Claude-LLM data. These patterns may include introductory words such as "Sure! Here is the academic article abstract:", or instances where the LLM rejects the prompted task. In this work, we demonstrate that detectors trained on such data use such patterns as shortcuts, which facilitates spoofing attacks on the trained detectors. We consequently reprocessed the DetectRL dataset with several cleansing operations. Experiments show that such data cleansing makes direct attacks more difficult. The reprocessed dataset is publicly available.

In addition they have also shown impressive capabilities in different domains, like coding, science and math. In this short paper, taking math as an example domain, we study the performance of different LLMs across languages. Experimental results show that there exists a non-negligible and consistent gap in the performance of the models across languages. Interestingly, and somewhat against expectations, the gap exists for both high-and low-resource languages. We hope that these results influence further research into cross-lingual capability generalization for next generation LLMs. If it weren't for the fact that they are false! By analyzing one of the standard multilingual math benchmarks (MGSM), we determine that several translation errors are present in the data. Furthermore, the lack of standardized answer extraction from LLM outputs further influences the final results. We propose a method for automatic quality assurance to address the first issue at scale, and give recommendations to address the second one. Combining these two approaches we show that the aforementioned language gap mostly disappears, leading to completely different conclusions from our research. In recent years, large language models' capabilities have expanded in two primary directions: broader language coverage and enhanced performance on complex tasks. On the language dimension, it is now usual for LLMs to support not only high-resource languages languages (e.g. This is a very important and welcome progress direction in order to improve the inclusivity of AI applications and research.

Criminal justice administrative data contain only a limited amount of information about the committed offense. However, there is an unused source of extensive information in continental European courts' decisions: descriptions of criminal behaviors in verdicts by which offenders are found guilty. In this paper, we study the feasibility of extracting these descriptions from publicly available court decisions from Slovakia. We use two different approaches for retrieval: regular expressions and large language models (LLMs). Our baseline was a simple method employing regular expressions to identify typical words occurring before and after the description. The advanced regular expression approach further focused on "sparing" and its normalization (insertion of spaces between individual letters), typical for delineating the description. The LLM approach involved prompting the Gemini Flash 2.0 model to extract the descriptions using predefined instructions. Although the baseline identified descriptions in only 40.5% of verdicts, both methods significantly outperformed it, achieving 97% with advanced regular expressions and 98.75% with LLMs, and 99.5% when combined. Evaluation by law students showed that both advanced methods matched human annotations in about 90% of cases, compared to just 34.5% for the baseline. LLMs fully matched human-labeled descriptions in 91.75% of instances, and a combination of advanced regular expressions with LLMs reached 92%.

Cloud computing is ubiquitous, with a growing number of services being hosted on the cloud every day. Typical cloud compute systems allow administrators to write policies implementing access control rules which specify how access to private data is governed. These policies must be manually written, and due to their complexity can often be error prone. Moreover, existing policies often implement complex access control specifications and thus can be difficult to precisely analyze in determining their behavior works exactly as intended. Recently, Large Language Models (LLMs) have shown great success in automated code synthesis and summarization. Given this success, they could potentially be used for automatically generating access control policies or aid in understanding existing policies. In this paper, we explore the effectiveness of LLMs for access control policy synthesis and summarization. Specifically, we first investigate diverse LLMs for access control policy synthesis, finding that: although LLMs can effectively generate syntactically correct policies, they have permissiveness issues, generating policies equivalent to the given specification 45.8% of the time for non-reasoning LLMs, and 93.7% of the time for reasoning LLMs. We then investigate how LLMs can be used to analyze policies by introducing a novel semantic-based request summarization approach which leverages LLMs to generate a precise characterization of the requests allowed by a policy. Our results show that while there are significant hurdles in leveraging LLMs for automated policy generation, LLMs show promising results when combined with symbolic approaches in analyzing existing policies.

This study examines the performance of ChatGPT with an experiment in the legal domain. We compare the outcome with it a baseline using regular expressions (Regex), rather than focusing solely on the assessment against human performance. The study reveals that even if ChatGPT has access to the necessary knowledge and competencies, it is unable to assemble them, reason through, in a way that leads to an exhaustive result. This unveils a major limitation of ChatGPT. Intelligence encompasses the ability to break down complex issues and address them according to multiple required competencies, providing a unified and comprehensive solution. In the legal domain, one of the most crucial tasks is reading legal decisions and extracting key passages condensed from principles of law (PoLs), which are then incorporated into subsequent rulings by judges or defense documents by lawyers. In performing this task, artificial intelligence lacks an all-encompassing understanding and reasoning, which makes it inherently limited. Genuine intelligence, remains a uniquely human trait, at least in this particular field.